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How to Clean & Disinfect Your Reptile’s Tank: 10 Simple Steps

Infrared heat lamp for reptile and amphibian care

Your pet reptile’s tank is their entire world. Since they can’t keep their own space clean, it’s up to you as their owner to get the job done right. Cleaning your reptile tank is a vital piece of husbandry and must be done regularly.

An unclean environment can lead to a slew of health issues and veterinary bills that would otherwise be easily avoided. Like any other pets, reptiles can transmit zoonotic diseases, especially salmonellosis caused by Salmonella, so you want to keep up with cleaning to help yourself and others in the household stay safe. Read on to learn how to safely and effectively clean your reptile’s tank.

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The 10 Steps to Clean Your Reptile’s Tank

1. Gather Your Supplies

When it’s time to clean your reptile tank, the first thing you want to do is gather all the necessary supplies. Since there are quite a few things you need, it will be much more convenient if you have them all in one place and ready to go.

  • Disposable gloves: It’s highly recommended that you wear disposable gloves if you are to come in contact with any feces. Reptiles can transmit Salmonella and other types of bacteria through handling or by you coming into contact with the contents of their habitat.
  • Paper towels or sponges: Paper towels or sponges can be used to wipe down, clean, and disinfect the tank.
  • Putty knife or razor blade: Either a putty knife or razor blade will enable you to remove anything that is stuck to the surface of the tank.
  • Old toothbrush: This will allow you to thoroughly scrub and clean up those hard-to-reach areas of the tank, like seams and corners. It’s also a great thing to have when you are scrubbing their tank accessories since it can get down into hard-to-reach places.
  • Dish soap: Dish soap can be used along with hot water to scrub both the interior and exterior of the tank.
  • Bleach, vinegar, or terrarium cleaner: These products are used to disinfect the tank and kill potential bacteria.
  • Bucket or large bowl: When you remove the tank accessories, you will want a place to put them before you clean them so they don’t come in contact with other surfaces.
  • Temporary enclosure: This should be a safe, secure place for your reptile as you clean the habitat.
  • Trash can
  • Fresh substrate

2. Remove Your Reptile

Once you have all your supplies set aside, it’s time to remove your reptile from their enclosure and place them in the secure temporary enclosure so they can comfortably wait out the process. You can use a backup tank, container, or box; just make sure it is secure enough that they can’t escape. The last thing you want to worry about is your pet being on the loose.

We strongly recommend putting them in a separate room for their safety. Reptiles are sensitive to any chemical fumes that are emitted by these cleaning products. It can lead to severe respiratory issues and is dangerous to their health. Keeping them far away from any cleaners will help ensure that they remain as safe and healthy as possible.

Bearded dragon
Image Credit: Robert Keresztes, Shutterstock

3. Turn Off All Heating Sources and Remove Temperature/Humidity Monitors

Different reptiles have different heating and lighting requirements, so it won’t be the same for all of them. Since reptiles are cold-blooded, they regulate their body temperature through a process called thermoregulation.

As pets, reptiles require external heat sources to keep them at the appropriate temperature within their habitats. This includes different types of lighting, under-tank heating mats, and heating tape. Heat and humidity are also monitored by a thermometer and hygrometer.

Once your reptile is safely inside their temporary enclosure, turn off all sources of heat, and place each item in a safe place until you are done. Also, remove the thermometer and/or hygrometer to keep them from being damaged as you clean.  Some of these heat sources can get quite hot, so make sure to use caution to prevent burning yourself.


4. Remove Accessories and Décor

Now it’s time to remove all accessories and tank décor. These include hides, water bowls, plants, logs, and anything else that isn’t disposable. Since these items come in regular contact with your pet, place them in a bucket or a large bowl as they wait to be cleaned.

This is for sanitary reasons because they could have remnants of feces or urate on them that you don’t want to come into contact with your regular surfaces. If you choose not to place them in a bucket, at least make sure you do not put them in a sink that is close to where you prepare food or drinks.

a pet chameleon in a tank
Image Credit: Freer, Shutterstock

5. Throw Out the Substrate

Once you have everything out of the tank, it’s time to throw out the substrate. Simply dump it into a nearby trash can, and brush off any pieces of substrate that have stuck to the surface of the tank. If you have stubborn pieces, use your gloved fingers or even a paper towel to remove them.


6. Clean the Tank

Using hot water and dish soap, scrub all the interior surfaces of the tank. This can be done with sponges or a paper towel. If there are any remnants of feces or urate stuck to the surface, you can use either a razor blade or putty knife to gently scrape it off. Use an old toothbrush to reach any hard-to-reach areas like the corners and seams of the tank. Once the tank has been scrubbed thoroughly, rinse it with clean water.

Once cleaned off, you can disinfect using a 10% bleach solution, terrarium cleaner, or a white distilled vinegar solution. These products are used to kill any remaining bacteria that could be left over and leave the glass looking clear, crisp, and streak free.

Vinegar is less effective at disinfecting compared to bleach, but it has been proven effective in killing Salmonella, E. coli, and Listeria monocytogenes, with Salmonella being the main concern for reptile owners. It’s a great, eco-friendly, safe option that many reptile keepers use. Bleach is also highly effective at disinfecting, but ensure that you use the recommended dilution.

There are plenty of reptile-safe terrarium cleaners available on the market; not all are aimed at disinfecting but will effectively clean the tank. Do your research, and read the reviews from other reptile parents if you choose to go this route.

Once you are finished disinfecting, you need to rinse thoroughly with hot water, and as a general rule, you should rinse it again. You do not want any leftover disinfectant solution to remain in the tank when you put your pet back inside. Allow the tank to dry as you move on to cleaning the accessories.

rubber gloves worn on hands
Image Credit: Sergo elst8, Shutterstock

7. Wash All Accessories and Décor

As the tank dries, take all the accessories and start cleaning them one by one with hot water, dish soap, and your sponge or paper towel. You may need to use that toothbrush to get into any small crevices for the most thorough cleaning.

If you want to disinfect these items, you can use your chosen solution to do so. Just make sure you rinse thoroughly and rinse again to make sure all the solution has been removed.


8. Allow the Tank and Accessories to Dry

Once the tank and the accessories have been rinsed off, allow everything to dry. You can help speed along the process by using a towel, but make sure it won’t leave behind any residue or cause streaking on the glass.

You do not want any excess moisture from cleaning to remain in the tank or on the objects, as it could cause the humidity to increase inside the habitat, and this could be harmful to a species that requires an arid environment.

Rare species reptiles lizard frog in tanks
Image By: Kitmaumau, Shutterstock

9. Reconstruct the Habitat

Do a quick check all over the tank to ensure that there are no cracks. Also, make sure there are no frayed or cracked wires on the heating sources, thermometer, and hygrometer before you set everything back up. Put in the fresh substrate, and reconstruct the habitat as it was before you cleaned it, accessories and all.

You will want to make sure all heating sources are plugged in and working properly. It can take a few minutes for the heating mats to warm back up, but you should be able to feel some warmth radiating off them pretty quickly. Refill the clean water bowl with fresh, clean water, and the tank should be ready for its inhabitant.


10. Return Your Reptile and Give Them Privacy

Remove any gloves, and don’t forget to wash your hands before handling your pet. Gently place your reptile back in their tidy home to let them readjust. It can be stressful for them when they are displaced momentarily.

Some species or individuals may seem completely unbothered by the process, while others may come off as fearful or shy. We recommend giving them privacy and quiet time to allow them to reacclimate, just in case. Put away all your supplies, and wash your hands again for good measure!

a pet chameleon in a tank
Image Credit By: Freer, Shutterstock

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The Importance of Cleaning Your Reptile’s Tank

While doing regular deep cleaning of the tank is crucial, you should also keep up with daily maintenance to ensure your precious reptilian’s environment is as clean as possible. Not only will this help prevent the transmission of any zoonotic diseases, but it will also ensure that they are healthy.

A clean, healthy living environment that is kept at the proper temperature and humidity is necessary for your reptile to thrive and live a long life. The husbandry requirements vary significantly among pet reptiles, so make sure you research your specific species to ensure that you are providing the correct care.

An unclean tank can be a breeding ground for bacteria, mold, and other pathogens, which can be harmful to both you and your reptile. They will be at risk for respiratory illness, skin issues, and premature death if they live in an unclean environment.

How Often Should I Thoroughly Clean the Tank?

Some pet reptiles are cleaner and easier to maintain than others, so the correct answer here can vary. Some reptiles will even burrow and leave waste buried in the substrate, so it’s important to clean the tank thoroughly and replace the substrate regularly to prevent waste buildup.

It is recommended that you do a thorough cleaning and disinfect the enclosure once every 2 to 3 months or as needed. Keep a close eye on the tank’s cleanliness, and use your best judgment. If you feel like it could need a deep clean sooner, there’s certainly no harm in doing so.

Green chameleon is perching on tree branch
Image Credit By: Konstantin Aksenov, Shutterstock

Regular Maintenance Tips for Keeping the Enclosure Clean Between Deep Cleanings

Deep cleaning is just one aspect of the tank’s upkeep. Here are important tips for frequent maintenance that will help keep your reptile’s enclosure as clean as possible in between those thorough cleanings.

  • Provide fresh, clean water daily.
  • Clean the water bowl often, as it can easily get slimy on the inside.
  • Replace heat mats and/or bulbs as needed.
  • Remove any uneaten food promptly.
  • Remove any feces or urate as soon as you notice them.
  • Clean accessories anytime you notice any feces or other remnants on the surface.

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Conclusion

Doing a thorough, deep clean of your reptile’s tank is an important part of their care routine. Regardless of which species of reptile you have, they need a clean and healthy environment to remain healthy and live their best life. It’s recommended that you thoroughly clean and replace the substrate at least once every 2 to 3 months. Depending on the species and their habits, you may need to do so more often. Don’t forget to keep up with regular maintenance to keep their habitat in good shape in the meantime.


Featured Image Credit: Marina Veder, Shutterstock

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